Deep Research MCP Server π
About
MCP Deep Research Server using Gemini creating a Research AI Agent
Explore
- MCP Integration: Available as a Model Context Protocol tool for seamless integration with AI agents
- Iterative Research: Performs deep research by iteratively generating search queries, processing results, and diving deeper based on findings
- Intelligent Query Generation: Uses Gemini LLMs to generate targeted search queries based on research goals and previous findings
- Depth & Breadth Control: Configurable parameters to control how wide (breadth) and deep (depth) the research goes
- Smart Follow-up: Generates follow-up questions to better understand research needs
- Comprehensive Reports: Produces detailed markdown reports with findings and sources
- Concurrent Processing: Handles multiple searches and result processing in parallel for efficiency
- Persistent Knowledge with PostgreSQL: π Leverages a PostgreSQL database for storing research data, ensuring data persistence across sessions and enabling efficient retrieval of past findings. This allows the agent to build upon previous knowledge and avoid redundant research.
Setting up with Highlight
This MCP is not yet compatible with Highlight’s one-click setup. However, you can still use it with Highlight by following these steps:
- Download and install Highlight from highlightai.com/download
- Navigate to the plugins tab and select "Add Custom Plugin"
-
Configure the plugin with the settings below
Plugin Name
Deep Research MCP Server πCommand (node, npx, python, etc.)Please refer to the README for specific instructions on how to obtain API keys or other required environment variables.
- Enable "Start Automatically" if you want the plugin to start when Highlight launches
From the repository
For standalone usage without MCP, you can use the CLI interface:
npm run start "Your research query here"
To test the MCP server with the inspector:
npx @modelcontextprotocol/inspector node --env-file .env.local dist/mcp-server.js
query
(string): The research query to investigate
depth
(number, 1-5): How deep to go in the research tree
breadth
(number, 1-5): How broad to make each research level
existingLearnings
(string[], optional): Array of existing research findings to build upon
The deep research functionality is available as an MCP tool that can be used by AI agents. To start the MCP server:
node --env-file .env.local dist/mcp-server.js
The tool provides the following parameters:
- query (string): The research query to investigate
- depth (number, 1-5): How deep to go in the research tree
- breadth (number, 1-5): How broad to make each research level
- existingLearnings (string[], optional): Array of existing research findings to build upon
Example tool usage in an agent:
const result = await mcp.invoke("deep-research", {
query: "What are the latest developments in quantum computing?",
depth: 3,
breadth: 3
});
The tool returns:
- A detailed markdown report of the findings
- List of sources used in the research
- Metadata about learnings and visited URLs
Claude Desktop / Cursor
Paste into your MCP client config file to install this server.
{
"mcpServers": {
"deep research mcp server \ud83d\ude80": {
"deep-research-mcp-ssdeanx": {
"command": "node",
"args": [
"src/db.ts"
]
}
}
}
}
McpServers
{
"deep-research-mcp-ssdeanx": {
"command": "node",
"args": [
"src/db.ts"
]
}
}
π Table of Contents
- β¨ How It Works
- π Features
- βοΈ Requirements
- π οΈ Setup
- π Usage
- π License
π€ Deep Research Gemini
An AI-powered research assistant that performs iterative, deep research on any topic by combining search engines, web scraping, and Gemini large language models. Available as a Model Context Protocol (MCP) tool for seamless integration with AI agents.
The goal of this repo is to provide the simplest implementation of a deep research agent - e.g. an agent that can refine its research direction over time and deep dive into a topic. Goal is to keep the repo size at <500 LoC so it is easy to understand and build on top of.
π Research Agent + PostgreSQL Integration
The research agent works seamlessly with PostgreSQL to create an efficient research system:
1. Knowledge Persistence: Each research finding and URL is stored in PostgreSQL, creating a growing knowledge base
2. Smart Caching: Previously processed URLs are tracked to avoid duplicate processing
3. Learning Context: The agent can reference past findings to guide new research directions
4. Query Optimization: Similar research queries can leverage existing database knowledge
5. Efficient Retrieval: Fast access to historical research data through indexed PostgreSQL queries
This integration enables the agent to build upon previous research while maintaining a lightweight codebase.
β¨ How It Works
flowchart TB
subgraph Input
Q[User Query]
B[Breadth Parameter]
D[Depth Parameter]
end
DR[Deep Research] -->
SQ[SERP Queries] -->
PR[Process Results]
subgraph Results[Results]
direction TB
NL((Learnings))
ND((Directions))
end
PR --> NL
PR --> ND
DP{depth > 0?}
RD["Next Direction:
- Prior Goals
- New Questions
- Learnings"]
MR[Markdown Report]
DB[PostgreSQL Database]
%% Main Flow
Q & B & D --> DR
%% Results to Decision
NL & ND --> DP
%% Circular Flow
DP -->|Yes| RD
RD -->|New Context| DR
%% Final Output
DP -->|No| MR
DR --> DB
DB --> NL
%% Styling
classDef input fill:#7bed9f,stroke:#2ed573,color:black
classDef process fill:#70a1ff,stroke:#1e90ff,color:black
classDef recursive fill:#ffa502,stroke:#ff7f50,color:black
classDef output fill:#ff4757,stroke:#ff6b81,color:black
classDef results fill:#a8e6cf,stroke:#3b7a57,color:black
class Q,B,D input
class DR,SQ,PR process
class DP,RD recursive
class MR output
class NL,ND results
class DB output
π Features
- MCP Integration: Available as a Model Context Protocol tool for seamless integration with AI agents
- Iterative Research: Performs deep research by iteratively generating search queries, processing results, and diving deeper based on findings
- Intelligent Query Generation: Uses Gemini LLMs to generate targeted search queries based on research goals and previous findings
- Depth & Breadth Control: Configurable parameters to control how wide (breadth) and deep (depth) the research goes
- Smart Follow-up: Generates follow-up questions to better understand research needs
- Comprehensive Reports: Produces detailed markdown reports with findings and sources
- Concurrent Processing: Handles multiple searches and result processing in parallel for efficiency
- Persistent Knowledge with PostgreSQL: π Leverages a PostgreSQL database for storing research data, ensuring data persistence across sessions and enabling efficient retrieval of past findings. This allows the agent to build upon previous knowledge and avoid redundant research.
βοΈ Requirements
- Node.js environment (v22.x recommended)
- API keys for:
- Firecrawl API πΈοΈ (for web search and content extraction)
- Gemini API π§ (for Gemini 2.0 models)
- PostgreSQL database π (running locally or remotely)
π οΈ Setup
Node.js
1. Clone the repository
2. Install dependencies:
npm install
- Set up environment variables in a .env.local file:
```bash
GEMINI_API_KEY="your_gemini_key"
FIRECRAWL_KEY="your_firecrawl_key"
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